2023.
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Scanpy can be a great tool to get the clustering done.

Scanpy workflow for CyTOF

Scanpy workflow for CyTOF

R vs Scanpy

  • The Scanpy clustering results are consistent with those from R.

Mixing results

  • Mixing results from R and scanpy makes sense, too.

The other way of mixing

  • Mixing results from R and scanpy makes sense, too.